marbl_tracers module reference¶

A tracer package for tracers computed in the MARBL library.

Data Types¶

`temp_marbl_diag`	Temporary type for diagnostic variables coming from MARBL Allocate exactly one of field_[23]d.
`tracer_ind_type`	MOM6 needs to know the index of some MARBL tracers to properly apply river fluxes.
`saved_state_for_marbl_type`	MOM needs to store some information about saved_state; besides providing these fields to MARBL, they are also written to restart files.
`marbl_tracer_data`	Pointer to tracer concentration and to tracer_type in tracer registry.
`marbl_tracers_cs`	The control structure for the MARBL tracer package.

Functions/Subroutines¶

`configure_marbl_tracers()`	This subroutine is used to read marbl_in, configure MARBL accordingly, and then call MARBL’s initialization routine.
`register_marbl_tracers()`	This subroutine is used to register tracer fields and subroutines to be used with MOM.
`initialize_marbl_tracers()`	This subroutine initializes the CSntr tracer fields in tr(:,:,:,:) and it sets up the tracer output.
`register_marbl_diags()`	This subroutine is used to register tracer fields and subroutines to be used with MOM.
`setup_saved_state()`	This subroutine allocates memory for saved state fields and registers them in the restart files.
`marbl_tracers_column_physics()`	This subroutine applies diapycnal diffusion and any other column tracer physics or chemistry to the tracers from this file.
`marbl_tracers_set_forcing()`	This subroutine reads time-varying forcing from files.
`marbl_tracers_stock()`	This function calculates the mass-weighted integral of all tracer stocks, returning the number of stocks it has calculated.
`marbl_tracers_surface_state()`	This subroutine extracts the surface fields from this tracer package that are to be shared with the atmosphere in coupled configurations.
`marbl_tracers_get()`	Copy the requested interior tendency output field into an array.
`marbl_tracers_end()`	Clean up any allocated memory after the run.
`set_riv_flux_tracer_inds()`
`print_marbl_log()`	This subroutine writes the contents of the MARBL log using MOM_error(NOTE, …).

Detailed Description¶

Currently configured for use with marbl0.36.0 https://github.com/marbl-ecosys/MARBL/releases/tag/marbl0.36.0 (clone entire repo into pkg/MARBL)

Type Documentation¶

type marbl_tracers/temp_marbl_diag¶

Temporary type for diagnostic variables coming from MARBL Allocate exactly one of field_[23]d.

Type fields:

% id [integer,private] :: index into MOM diagnostic structure
% field_2d [real(:,:),allocatable, private] :: memory for 2D field
% field_3d [real(:,:,:),allocatable, private] :: memory for 3D field

type marbl_tracers/tracer_ind_type¶

MOM6 needs to know the index of some MARBL tracers to properly apply river fluxes.

Type fields:

% no3_ind [integer,private] :: NO3 index.
% po4_ind [integer,private] :: PO4 index.
% don_ind [integer,private] :: DON index.
% donr_ind [integer,private] :: DONr index.
% dop_ind [integer,private] :: DOP index.
% dopr_ind [integer,private] :: DOPr index.
% sio3_ind [integer,private] :: SiO3 index.
% fe_ind [integer,private] :: Fe index.
% doc_ind [integer,private] :: DOC index.
% docr_ind [integer,private] :: DOCr index.
% alk_ind [integer,private] :: ALK index.
% alk_alt_co2_ind [integer,private] :: ALK_ALT_CO2 index.
% dic_ind [integer,private] :: DIC index.
% dic_alt_co2_ind [integer,private] :: DIC_ALT_CO2 index.
% abio_dic_ind [integer,private] :: ABIO_DIC index.
% abio_di14c_ind [integer,private] :: ABIO_DI14C index.

type marbl_tracers/saved_state_for_marbl_type¶

MOM needs to store some information about saved_state; besides providing these fields to MARBL, they are also written to restart files.

Type fields:

% short_name [character (len=200),private] :: name of variable being saved
% file_varname [character (len=200),private] :: name of variable in restart file
% units [character (len=200),private] :: variable units
% field_2d [real(:,:),pointer, private] :: memory for 2D field
% field_3d [real(:,:,:),pointer, private] :: memory for 3D field

type marbl_tracers/marbl_tracer_data¶

Pointer to tracer concentration and to tracer_type in tracer registry.

Type fields:

% tr [real(:,:,:),pointer, private] :: Array of tracers used in this subroutine [CU ~> conc] (ALK tracers use meq m-3 instead of mmol m-3)
% tr_ptr [type( tracer_type ),pointer, private] :: pointer to tracer inside Tr_reg

type marbl_tracers/marbl_tracers_cs¶

The control structure for the MARBL tracer package.

Type fields:

% ntr [integer] :: The number of tracers that are actually used.
% debug [logical] :: If true, write verbose checksums for debugging purposes.
% base_bio_on [logical] :: Will MARBL use base biotic tracers?
% abio_dic_on [logical] :: Will MARBL use abiotic DIC / DI14C tracers?
% ciso_on [logical] :: Will MARBL use isotopic tracers?
% restore_count [integer] :: The number of tracers MARBL is configured to restore.
% coupled_tracers [logical] :: These tracers are not offered to the coupler.
% use_ice_category_fields [logical] :: Forcing will include multiple ice categories for ice_frac and shortwave.
% request_chl_from_marbl [logical] :: MARBL can provide Chl to use in
% ice_ncat [integer] :: Number of ice categories when use_ice_category_fields = True.
% ic_min [real] :: Minimum value for tracer initial conditions [CU ~> conc].
% ic_file [character (len=200)] :: The file in which the age-tracer initial values cam be found.
% ongrid [logical] :: True if IC_file is already interpolated to MOM grid.
% tr_reg [type( tracer_registry_type ),pointer] :: A pointer to the tracer registry.
% tracer_data [type( marbl_tracer_data )(:),allocatable] :: type containing tracer data and pointer into tracer registry
% ind_tr [integer(:),allocatable] :: Indices returned by aof_set_coupler_flux if it is used and the surface tracer concentrations are to be provided to the coupler.
% diag [type( diag_ctrl ),pointer] :: A structure that is used to regulate the timing of diagnostic output.
% restart_csp [type( mom_restart_cs ),pointer] :: A pointer to the restart control structure.
% tr_desc [type( vardesc )(:),allocatable] :: Descriptions and metadata for the tracers.
% tracers_may_reinit [logical] :: If true the tracers may be initialized if not found in a restart file.
% fesedflux_file [character (len=200)] :: name of [netCDF] file containing iron sediment flux
% feventflux_file [character (len=200)] :: name of [netCDF] file containing iron vent flux
% d14c_dataset [type( forcing_timeseries_dataset )(3)] :: File and time axis information for d14c forcing.
% d14c_bands [real(3)] :: forcing is organized into bands: [30 N, 90 N]; [30 S, 30 N]; [90 S, 30 S] This variable contains D14C for each band [CU ~> conc]
% d14c_id [integer] :: id for diagnostic field with d14c forcing
% read_riv_fluxes [logical] :: If true, use river fluxes supplied from an input file. This is temporary, we will always read river fluxes.
% riv_flux_dataset [type( forcing_timeseries_dataset )] :: File and time axis information for river fluxes.
% restoring_source [character (len=4)] :: location of tracer restoring data valid values: file, none
% restoring_nz [integer] :: number of levels in tracer restoring file
% restoring_z_edges [real(:),allocatable] :: The depths of the cell interfaces in the tracer restoring file [Z ~> m].
% restoring_dz [real(:),allocatable] :: The thickness of the cell layers in the tracer restoring file [H ~> m].
% restoring_timescale_nz [integer] :: number of levels in tracer restoring timescale file
% restoring_timescale_z_edges [real(:),allocatable] :: The depths of the cell interfaces in the tracer restoring timescale file [Z ~> m].
% restoring_timescale_dz [real(:),allocatable] :: The thickness of the cell layers in the tracer restoring timescale file [H ~> m].
% restoring_i_tau_source [character (len=14)] :: location of inverse restoring timescale data valid values: file, grid_dependent
% restoring_file [character (len=200)] :: name of [netCDF] file containing tracer restoring data
% restoring_remapcs [type( remapping_cs )] :: Remapping parameters and work arrays for tracer restoring / timescale.
% restoring_i_tau_file [character (len=200)] :: name of [netCDF] file containing inverse restoring timescale
% restoring_i_tau_var_name [character (len=200)] :: name of field containing inverse restoring timescale
% marbl_settings_file [character (len=35)] :: name of [text] file containing MARBL settings
% bot_flux_mix_thickness [real] :: for bottom flux -> tendency conversion, assume uniform mixing over bottom layer of prescribed thickness [Z ~> m]
% ibfmt [real] :: Reciprocal of bot_flux_mix_thickness [Z-1 ~> m-1].
% surface_flux_diags [type( temp_marbl_diag )(:),allocatable] :: collect surface flux diagnostics from all columns before posting
% interior_tendency_diags [type( temp_marbl_diag )(:),allocatable] :: collect tendency diagnostics from all columns before posting
% surface_flux_saved_state [type( saved_state_for_marbl_type )(:),allocatable] :: surface_flux saved state
% interior_tendency_saved_state [type( saved_state_for_marbl_type )(:),allocatable] :: interior_tendency saved state
% tracer_inds [type( tracer_ind_type )] :: Indices to tracers that will have river fluxes added to STF.
% id_surface_flux_out [integer(:),allocatable] :: Need to store global output from both marbl_instancesurface_flux_compute() and marbl_instanceinterior_tendency_compute(). For the former, just need id to register because we already copy data into CSSTF; latter requires copying data and indices so currently using temp_MARBL_diag for that.
% id_surface_flux_from_salt_flux [integer(:),allocatable] :: register_diag indices for surface_flux from salt_flux
% interior_tendency_out [type( temp_marbl_diag )(:),allocatable] :: collect interior tendencies for diagnostic output
% interior_tendency_out_zint [type( temp_marbl_diag )(:),allocatable] :: vertical integral of interior tendencies (full column)
% interior_tendency_out_zint_100m [type( temp_marbl_diag )(:),allocatable] :: vertical integral of interior tendencies (top 100m)
% bot_flux_to_tend_id [integer] :: register_diag index for BOT_FLUX_TO_TEND
% fracr_cat_id [integer(:),allocatable] :: register_diag index for per-category ice fraction
% qsw_cat_id [integer(:),allocatable] :: register_diag index for per-category shortwave
% dic_salt_ratio [real] :: ratio to convert salt surface flux to DIC surface flux [conc ppt-1]
% alk_salt_ratio [real] :: ratio to convert salt surface flux to ALK surface flux [conc ppt-1]
% stf [real(:,:,:),allocatable] :: surface fluxes returned from MARBL to use in tracer_vertdiff (dims: i, j, tracer) [conc Z T-1 ~> conc m s-1]
% sfo [real(:,:,:),pointer] :: surface flux output returned from MARBL for use in GCM e.g. CO2 flux to pass to atmosphere (dims: i, j, num_sfo) Units vary based on index of num_sfo dimension
% ito [real(:,:,:,:),pointer] :: interior tendency output returned from MARBL for use in GCM e.g. total chlorophyll to use in shortwave penetration (dims: i, j, k, num_ito) Units vary based on index of num_ito dimension
% u10_sqr_ind [integer] :: index of MARBL forcing field array to copy 10-m wind (squared) into
% sss_ind [integer] :: index of MARBL forcing field array to copy sea surface salinity into
% sst_ind [integer] :: index of MARBL forcing field array to copy sea surface temperature into
% ifrac_ind [integer] :: index of MARBL forcing field array to copy ice fraction into
% dust_dep_ind [integer] :: index of MARBL forcing field array to copy dust flux into
% fe_dep_ind [integer] :: index of MARBL forcing field array to copy iron flux into
% nox_flux_ind [integer] :: index of MARBL forcing field array to copy NOx flux into
% nhy_flux_ind [integer] :: index of MARBL forcing field array to copy NHy flux into
% atmpress_ind [integer] :: index of MARBL forcing field array to copy atmospheric pressure into
% xco2_ind [integer] :: index of MARBL forcing field array to copy CO2 flux into
% xco2_alt_ind [integer] :: index of MARBL forcing field array to copy CO2 flux (alternate CO2) into
% d14c_ind [integer] :: index of MARBL forcing field array to copy d14C into
% id_din_riv [type(external_field)] :: external_field types for river fluxes (added to surface fluxes)
% id_don_riv [type(external_field)] :: id for time_interp_external.
% id_dip_riv [type(external_field)] :: id for time_interp_external.
% id_dop_riv [type(external_field)] :: id for time_interp_external.
% id_dsi_riv [type(external_field)] :: id for time_interp_external.
% id_dfe_riv [type(external_field)] :: id for time_interp_external.
% id_dic_riv [type(external_field)] :: id for time_interp_external.
% id_alk_riv [type(external_field)] :: id for time_interp_external.
% id_doc_riv [type(external_field)] :: id for time_interp_external.
% id_d14c [type(external_field)(3)] :: external_field type for d14c (needed if abio_dic_on is True)
% no3_riv_flux [integer] :: Indices for river fluxes (diagnostics)
% po4_riv_flux [integer] :: PO4 riverine flux.
% don_riv_flux [integer] :: DON riverine flux.
% donr_riv_flux [integer] :: DONr riverine flux.
% dop_riv_flux [integer] :: DOP riverine flux.
% dopr_riv_flux [integer] :: DOPr riverine flux.
% sio3_riv_flux [integer] :: SiO3 riverine flux.
% fe_riv_flux [integer] :: Fe riverine flux.
% doc_riv_flux [integer] :: DOC riverine flux.
% docr_riv_flux [integer] :: DOCr riverine flux.
% alk_riv_flux [integer] :: ALK riverine flux.
% alk_alt_co2_riv_flux [integer] :: ALK (alternate CO2) riverine flux.
% dic_riv_flux [integer] :: DIC riverine flux.
% dic_alt_co2_riv_flux [integer] :: DIC (alternate CO2) riverine flux.
% dustflux_ind [integer] :: Indices for forcing fields required to compute interior tendencies.
% par_col_frac_ind [integer] :: index of MARBL forcing field array to copy PAR column fraction into
% surf_shortwave_ind [integer] :: index of MARBL forcing field array to copy surface shortwave into
% potemp_ind [integer] :: index of MARBL forcing field array to copy potential temperature into
% salinity_ind [integer] :: index of MARBL forcing field array to copy salinity into
% pressure_ind [integer] :: index of MARBL forcing field array to copy pressure into
% fesedflux_ind [integer] :: index of MARBL forcing field array to copy iron sediment flux into
% o2_scalef_ind [integer] :: index of MARBL forcing field array to copy O2 scale length into
% remin_scalef_ind [integer] :: index of MARBL forcing field array to copy remin scale length into
% id_tracer_restoring [type(external_field)(:),allocatable] :: id number for time_interp_external
% tracer_restoring_ind [integer(:),allocatable] :: index of MARBL forcing field to copy per-tracer restoring field into
% tracer_i_tau_ind [integer(:),allocatable] :: index of MARBL forcing field to copy per-tracer inverse restoring timescale into
% d14c [real(:,:),allocatable] :: Memory for storing river fluxes, tracer restoring fields, and abiotic forcing.
% riv_fluxes [real(:,:,:),allocatable] :: river flux forcing for applyTracerBoundaryFluxesInOut (needs to be time-integrated when passed to function!) (dims: i, j, tracer) [conc m s-1]
% tracer_restoring_varname [character (len=15)(:),allocatable] :: name of variable being restored
% i_tau [real(:,:,:),allocatable] :: inverse restoring timescale for marbl tracers (dims: i, j, k) [s-1]
% restoring_in [real(:,:,:,:),allocatable] :: Restoring fields read from file (dims: i, j, restoring_nz, restoring_cnt) [tracer units].
% sfo_cnt [integer] :: Number of surface flux outputs as well as specific indices for each one.
% ito_cnt [integer] :: number of interior tendency outputs from MARBL
% flux_co2_ind [integer] :: index to co2 flux surface flux output
% total_chl_ind [integer] :: index to total chlorophyll interior tendency output
% fesedflux_scale_factor [real] :: scale factor for iron sediment flux [mmol umol-1 d s-1]
% fesedflux_nz [integer] :: number of levels in iron sediment flux file
% fesedflux_in [real(:,:,:),allocatable] :: Field to read iron sediment flux into [conc m s-1].
% feventflux_in [real(:,:,:),allocatable] :: Field to read iron vent flux into [conc m s-1].
% fesedflux_z_edges [real(:),allocatable] :: The depths of the cell interfaces in the input data [Z ~> m].
% fesedflux_dz [real(:,:,:),allocatable] :: The thickness of the cell layers in the input data [H ~> m].

Function/Subroutine Documentation¶

subroutine marbl_tracers/configure_marbl_tracers(GV, US, param_file, CS)¶

This subroutine is used to read marbl_in, configure MARBL accordingly, and then call MARBL’s initialization routine.

Parameters:

gv :: [in] The ocean’s vertical grid structure
us :: [in] A dimensional unit scaling type
param_file :: [in] A structure to parse for run-time parameters
cs :: A pointer that is set to point to the control structure for this module

Call to:

marbl_instances mom_error_handler::mom_error print_marbl_log

Called from:

register_marbl_tracers

function marbl_tracers/register_marbl_tracers(HI, GV, US, param_file, CS, tr_Reg, restart_CS, MARBL_computes_chl) [logical]¶

This subroutine is used to register tracer fields and subroutines to be used with MOM.

Parameters:

hi :: [in] A horizontal index type structure.
gv :: [in] The ocean’s vertical grid structure
us :: [in] A dimensional unit scaling type
param_file :: [in] A structure to parse for run-time parameters
cs :: A pointer that is set to point to the control structure for this module
tr_reg :: A pointer that is set to point to the control structure for the tracer advection and diffusion module.
restart_cs :: [inout] MOM restart control struct
marbl_computes_chl :: [out] If MARBL is computing chlorophyll, MOM may use it to compute SW penetration

Call to:

atmos_ocean_fluxes_mod::aof_set_coupler_flux configure_marbl_tracers mom_remapping::initialize_remapping marbl_instances mom_error_handler::mom_error mom_io::query_vardesc mom_tracer_z_init::read_z_edges mom_tracer_registry::register_tracer set_riv_flux_tracer_inds setup_saved_state mom_io::var_desc

subroutine marbl_tracers/initialize_marbl_tracers(restart, day, G, GV, US, h, param_file, diag, OBC, CS, sponge_CSp)¶

This subroutine initializes the CSntr tracer fields in tr(:,:,:,:) and it sets up the tracer output.

Parameters:

restart :: [in] .true. if the fields have already been read from a restart file.
day :: [in] Time of the start of the run.
g :: [inout] The ocean’s grid structure
gv :: [in] The ocean’s vertical grid structure
us :: [in] A dimensional unit scaling type
h :: [in] Layer thicknesses [H ~> m or kg m-2]
param_file :: [in] A structure to parse for run-time parameters
diag :: [in] Structure used to regulate diagnostic output.
obc :: This open boundary condition type specifies whether, where, and what open boundary conditions are used.
cs :: The control structure returned by a previous call to register_MARBL_tracers.
sponge_csp :: A pointer to the control structure for the sponges, if they are in use.

Call to:

marbl_instances mom_error_handler::mom_error mom_tracer_initialization_from_z::mom_initialize_tracer_from_z mom_io::query_vardesc mom_tracer_z_init::read_z_edges mom_diag_mediator::register_diag_field register_marbl_diags

subroutine marbl_tracers/register_marbl_diags(MARBL_diags, diag, day, G, id_diags)¶

This subroutine is used to register tracer fields and subroutines to be used with MOM.

Parameters:

marbl_diags :: [in] MARBL diagnostics from MARBL_instances
day :: [in] Time of the start of the run.
diag :: [in] Structure used to regulate diagnostic output.
g :: [in] The ocean’s grid structure
id_diags :: [inout] allocatable array storing diagnostic index number and buffer space for collecting diags from all columns

Call to:

mom_diag_mediator::register_diag_field

Called from:

initialize_marbl_tracers

subroutine marbl_tracers/setup_saved_state(MARBL_saved_state, HI, GV, restart_CS, tracers_may_reinit, local_saved_state)¶

This subroutine allocates memory for saved state fields and registers them in the restart files.

Parameters:

marbl_saved_state :: [in] MARBL saved state from MARBL_instances
hi :: [in] A horizontal index type structure.
gv :: [in] The ocean’s vertical grid structure
restart_cs :: [in] control structure to add saved state to restarts
tracers_may_reinit :: [in] used to determine mandatory flag in restart
local_saved_state :: [inout] allocatable array for local saved state

Call to:

mom_error_handler::mom_error

Called from:

register_marbl_tracers

subroutine marbl_tracers/marbl_tracers_column_physics(h_old, h_new, ea, eb, fluxes, dt, G, GV, US, CS, tv, KPP_CSp, nonLocalTrans, evap_CFL_limit, minimum_forcing_depth)¶

This subroutine applies diapycnal diffusion and any other column tracer physics or chemistry to the tracers from this file.

Parameters:

g :: [in] The ocean’s grid structure
gv :: [in] The ocean’s vertical grid structure
h_old :: [in] Layer thickness before entrainment [H ~> m or kg m-2].
h_new :: [in] Layer thickness after entrainment [H ~> m or kg m-2].
ea :: [in] an array to which the amount of fluid entrained
eb :: [in] an array to which the amount of fluid entrained
fluxes :: [in] A structure containing pointers to thermodynamic and tracer forcing fields. Unused fields have NULL ptrs.
dt :: [in] The amount of time covered by this call [T ~> s]
us :: [in] A dimensional unit scaling type
cs :: The control structure returned by a previous call to register_MARBL_tracers.
tv :: [in] A structure pointing to various thermodynamic variables
kpp_csp :: KPP control structure
nonlocaltrans :: [in] Non-local transport [1]
evap_cfl_limit :: [in] Limit on the fraction of the water that can be fluxed out of the top layer in a timestep [1]
minimum_forcing_depth :: [in] The smallest depth over which fluxes can be applied [m]

Call to:

mom_tracer_diabatic::applytracerboundaryfluxesinout atm_per_pa mom_cvmix_kpp::kpp_nonlocaltransport marbl_instances mom_error_handler::mom_error print_marbl_log mom_remapping::remapping_core_h mom_tracer_diabatic::tracer_vertdiff

subroutine marbl_tracers/marbl_tracers_set_forcing(day_start, G, CS)¶

This subroutine reads time-varying forcing from files.

Parameters:

day_start :: [in] Start time of the fluxes.
g :: [in] The ocean’s grid structure.
cs :: The control structure returned by a

Call to:

mom_interpolate::map_model_time_to_forcing_time

function marbl_tracers/marbl_tracers_stock(h, stocks, G, GV, CS, names, units, stock_index) [integer]¶

This function calculates the mass-weighted integral of all tracer stocks, returning the number of stocks it has calculated. If the stock_index is present, only the stock corresponding to that coded index is returned.

Parameters:

h :: [in] Layer thicknesses [H ~> m or kg m-2]
stocks :: [out] the mass-weighted integrated amount of each tracer, in kg times concentration units [kg conc].
g :: [in] The ocean’s grid structure
gv :: [in] The ocean’s vertical grid structure
cs :: The control structure returned by a previous call to register_MARBL_tracers.
names :: [out] the names of the stocks calculated.
units :: [out] the units of the stocks calculated.
stock_index :: [in] the coded index of a specific stock being sought.

Return:

undefined :: Return value: the number of stocks calculated here.

Call to:

mom_spatial_means::global_mass_int_efp mom_io::query_vardesc

Called from:

mom_tracer_flow_control::call_tracer_stocks

subroutine marbl_tracers/marbl_tracers_surface_state(sfc_state, G, US, CS)¶

This subroutine extracts the surface fields from this tracer package that are to be shared with the atmosphere in coupled configurations.

Parameters:

g :: [in] The ocean’s grid structure.
sfc_state :: [inout] A structure containing fields that describe the surface state of the ocean.
us :: [in] A dimensional unit scaling type
cs :: The control structure returned by a previous call to register_MARBL_tracers.

subroutine marbl_tracers/marbl_tracers_get(name, G, GV, array, CS)¶

Copy the requested interior tendency output field into an array.

Parameters:

name :: [in] Name of requested tracer.
g :: [in] The ocean’s grid structure.
gv :: [in] The ocean’s vertical grid structure.
array :: [inout] Array filled by this routine.
cs :: Pointer to the control structure for this module.

Call to:

mom_error_handler::mom_error

subroutine marbl_tracers/marbl_tracers_end(CS)¶

Clean up any allocated memory after the run.

Parameters:: cs :: [inout] The control structure returned by a previous call to register_MARBL_tracers.
Call to:: marbl_instances print_marbl_log
Called from:: mom_tracer_flow_control::tracer_flow_control_end

subroutine marbl_tracers/set_riv_flux_tracer_inds(CS)¶

Parameters:: cs :: [inout] The MARBL tracers control structure
Call to:: marbl_instances mom_error_handler::mom_error
Called from:: register_marbl_tracers

subroutine marbl_tracers/print_marbl_log(log_to_print, G, i, j)¶

This subroutine writes the contents of the MARBL log using MOM_error(NOTE, …).

Parameters:

log_to_print :: [in] MARBL log to include in MOM6 logfile
g :: [in] The ocean’s grid structure
i :: [in] i of (i,j) index of column providing the log
j :: [in] j of (i,j) index of column providing the log

Call to:

mom_error_handler::mom_error

Called from:

configure_marbl_tracers marbl_tracers_column_physics marbl_tracers_end